Jason Crane, PhD

Director of Computational Core
Radiology
+1 415 514-4426
Publications: 

Federated Learning used for predicting outcomes in SARS-COV-2 patients.

Research square

Flores M, Dayan I, Roth H, Zhong A, Harouni A, Gentili A, Abidin A, Liu A, Costa A, Wood B, Tsai CS, Wang CH, Hsu CN, Lee CK, Ruan C, Xu D, Wu D, Huang E, Kitamura F, Lacey G, Corradi GCA, Shin HH, Obinata H, Ren H, Crane J, Tetreault J, Guan J, Garrett J, Park JG, Dreyer K, Juluru K, Kersten K, Rockenbach MABC, Linguraru M, Haider M, AbdelMaseeh M, Rieke N, Damasceno P, Silva PMCE, Wang P, Xu S, Kawano S, Sriswa S, Park SY, Grist T, Buch V, Jantarabenjakul W, Wang W, Tak WY, Li X, Lin X, Kwon F, Gilbert F, Kaggie J, Li Q, Quraini A, Feng A, Priest A, Turkbey B, Glicksberg B, Bizzo B, Kim BS, Tor-Diez C, Lee CC, Hsu CJ, Lin C, Lai CL, Hess C, Compas C, Bhatia D, Oermann E, Leibovitz E, Sasaki H, Mori H, Yang I, Sohn JH, Murthy KNK, Fu LC, de Mendonça MRF, Fralick M, Kang MK, Adil M, Gangai N, Vateekul P, Elnajjar P, Hickman S, Majumdar S, McLeod S, Reed S, Graf S, Harmon S, Kodama T, Puthanakit T, Mazzulli T, Lavor VL, Rakvongthai Y, Lee YR, Wen Y

NIMG-44. INTEGRATING AUTOMATED LESION SEGMENTATIONS FROM SINGLE-IMAGES INTO ROUTINE CLINICAL WORKFLOW FOR VOLUMETRIC RESPONSE ASSESSMENT.

Neuro-oncology

Javier Villanueva-Meyer, Pablo Damasceno, Marisa LaFontaine, James Hawkins, Tracy Luks, Jason Crane, Janine Lupo

SURG-18. THE IMPACT OF NEUROLOGIC IMPAIRMENTS ON THE RELATIVE BENEFIT OF MAXIMAL EXTENT OF RESECTION IN NEWLY DIAGNOSED IDH-WILD TYPE GLIOBLASTOMA.

Neuro-oncology

Shawn Hervey-Jumper, Annette Molinaro, Cecilia Dalle Ore, Desmond Brown, Yalan Zhang, Ramin Morshed, Marisa LaFontaine, Simon Ammanuel, Anny Shai, Gayathri Warrier, Terri Rice, Yi Lin, Jason Crane, Joanna Phillips, Margaret Wrensch, John Wiencke, Nancy Ann Oberheim Bush, Jennie Taylor, Nicholas Butowski, Jennifer Clarke, Susan Chang, Manish Aghi, Philip Theodosopoulos, Mitchel Berger

Association of Maximal Extent of Resection of Contrast-Enhanced and Non-Contrast-Enhanced Tumor With Survival Within Molecular Subgroups of Patients With Newly Diagnosed Glioblastoma.

JAMA oncology

Molinaro AM, Hervey-Jumper S, Morshed RA, Young J, Han SJ, Chunduru P, Zhang Y, Phillips JJ, Shai A, Lafontaine M, Crane J, Chandra A, Flanigan P, Jahangiri A, Cioffi G, Ostrom Q, Anderson JE, Badve C, Barnholtz-Sloan J, Sloan AE, Erickson BJ, Decker PA, Kosel ML, LaChance D, Eckel-Passow J, Jenkins R, Villanueva-Meyer J, Rice T, Wrensch M, Wiencke JK, Oberheim Bush NA, Taylor J, Butowski N, Prados M, Clarke J, Chang S, Chang E, Aghi M, Theodosopoulos P, McDermott M, Berger MS

Hyperpolarized 13 C MRI data acquisition and analysis in prostate and brain at University of California, San Francisco.

NMR in biomedicine

Crane JC, Gordon JW, Chen HY, Autry AW, Li Y, Olson MP, Kurhanewicz J, Vigneron DB, Larson PEZ, Xu D

Kinetic Modeling of Hyperpolarized Carbon-13 Pyruvate Metabolism in the Human Brain.

IEEE transactions on medical imaging

Mammoli D, Gordon J, Autry A, Larson PEZ, Li Y, Chen HY, Chung B, Shin P, Van Criekinge M, Carvajal L, Slater JB, Bok R, Crane J, Xu D, Chang S, Vigneron DB

NIMG-66. COMPARISON OF STEADY STATE AND DYNAMIC BRAIN METABOLISM BY USING 1H MRSI AND HYPERPOLARIZED [1-13C]PYRUVATE IMAGING IN PATIENTS WITH GLIOMA.

Neuro-oncology

Yan Li, Adam Autry, Jeremy Gordon, Jason Crane, Beck Olson, Marisa Lafontaine, Ilwoo Park, Javier Villanueva-Meyer, Daniel Vigneron, Susan Chang, Sarah Nelson

Reliable and Reproducible GABA Measurements Using Automated Spectral Prescription at Ultra-High Field.

Frontiers in human neuroscience

Li Y, Bian W, Larson P, Crane JC, Parvathaneni P, Nagarajan S, Nelson SJ

Automated Prescription and Reconstruction of Brain MR Spectroscopy Data for Rapid Integration into the Clinical Workflow

Neurological Disorders & Epilepsy Journal

Jason C. Crane, Yan Li, Marram P. Olson, Marisa Lafontaine, Stojan Maleschlijski, Wei Bian, Christopher P. Hess and Sarah J. Nelson

Metabolic Profiling of IDH Mutation and Malignant Progression in Infiltrating Glioma.

Scientific reports

Jalbert LE, Elkhaled A, Phillips JJ, Neill E, Williams A, Crane JC, Olson MP, Molinaro AM, Berger MS, Kurhanewicz J, Ronen SM, Chang SM, Nelson SJ

Association of early changes in 1H MRSI parameters with survival for patients with newly diagnosed glioblastoma receiving a multimodality treatment regimen.

Neuro-oncology

Nelson SJ, Kadambi AK, Park I, Li Y, Crane J, Olson M, Molinaro A, Roy R, Butowski N, Cha S, Chang S

NIMG-32. 3D SHORT AND LONG ECHO TIME 1H MRSI IN PATIENTS WITH NON-ENHANCING GLIOMAS.

Neuro-oncology

Yan Li, Tracy Luks, Jason Crane, Sarah Nelson, Tracy McKnight

Serial analysis of 3D H-1 MRSI for patients with newly diagnosed GBM treated with combination therapy that includes bevacizumab.

Journal of neuro-oncology

Nelson SJ, Li Y, Lupo JM, Olson M, Crane JC, Molinaro A, Roy R, Clarke J, Butowski N, Prados M, Cha S, Chang SM

Detection of localized changes in the metabolism of hyperpolarized gluconeogenic precursors 13 C-lactate and 13 C-pyruvate in kidney and liver.

Magnetic resonance in medicine

von Morze C, Chang GY, Larson PE, Shang H, Allu PK, Bok RA, Crane JC, Olson MP, Tan CT, Marco-Rius I, Nelson SJ, Kurhanewicz J, Pearce D, Vigneron DB

Power estimation for non-standardized multisite studies.

NeuroImage

Keshavan A, Paul F, Beyer MK, Zhu AH, Papinutto N, Shinohara RT, Stern W, Amann M, Bakshi R, Bischof A, Carriero A, Comabella M, Crane JC, D'Alfonso S, Demaerel P, Dubois B, Filippi M, Fleischer V, Fontaine B, Gaetano L, Goris A, Graetz C, Gröger A, Groppa S, Hafler DA, Harbo HF, Hemmer B, Jordan K, Kappos L, Kirkish G, Llufriu S, Magon S, Martinelli-Boneschi F, McCauley JL, Montalban X, Mühlau M, Pelletier D, Pattany PM, Pericak-Vance M, Cournu-Rebeix I, Rocca MA, Rovira A, Schlaeger R, Saiz A, Sprenger T, Stecco A, Uitdehaag BMJ, Villoslada P, Wattjes MP, Weiner H, Wuerfel J, Zimmer C, Zipp F, Hauser SL, Oksenberg JR, Henry RG

NI-79RAPID ASSESSMENT OF LESION VOLUMES FOR PATIENTS WITH GLIOMA USING THE SMARTBRUSH SOFTWARE PACKAGE.

Neuro-oncology

Sana Vaziri, Marisa Lafontaine, Beck Olson, Jason C. Crane, Susan Chang, Janine Lupo, Sarah J. Nelson

Precision medicine in chronic disease management: The multiple sclerosis BioScreen.

Annals of neurology

Gourraud PA, Henry RG, Cree BA, Crane JC, Lizee A, Olson MP, Santaniello AV, Datta E, Zhu AH, Bevan CJ, Gelfand JM, Graves JS, Goodin DS, Green AJ, von Büdingen HC, Waubant E, Zamvil SS, Crabtree-Hartman E, Nelson S, Baranzini SE, Hauser SL

SIVIC: Open-Source, Standards-Based Software for DICOM MR Spectroscopy Workflows.

International journal of biomedical imaging

Crane JC, Olson MP, Nelson SJ

Imaging biomarkers of ramucirumab and olaratumab in patients with recurrent glioblastoma.

Journal of Clinical Oncology

Jaishri O'Neill Blakeley, Joy D. Fisher, Frank S. Lieberman, Janine Lupo, Louis B. Nabors, Jason Crane, Patrick Y. Wen, Andre Cote, David M. Peereboom, Qiuting Wen, Timothy Francis Cloughesy, H. Ian Robins, Serena Desideri, Stuart A. Grossman, Xiaobu Ye, Sarah Nelson

Strategies for rapid in vivo 1H and hyperpolarized 13C MR spectroscopic imaging.

Journal of magnetic resonance (San Diego, Calif. : 1997)

Nelson SJ, Ozhinsky E, Li Y, Park Iw, Crane J

Prospective image registration for automated scan prescription of follow-up knee images in quantitative studies.

Magnetic resonance imaging

Goldenstein J, Schooler J, Crane JC, Ozhinsky E, Pialat JB, Carballido-Gamio J, Majumdar S

Serial analysis of imaging parameters in patients with newly diagnosed glioblastoma multiforme.

Neuro-oncology

Li Y, Lupo JM, Polley MY, Crane JC, Bian W, Cha S, Chang S, Nelson SJ

3D sensitivity encoded ellipsoidal MR spectroscopic imaging of gliomas at 3T.

Magnetic resonance imaging

Ozturk-Isik E, Chen AP, Crane JC, Bian W, Xu D, Han ET, Chang SM, Vigneron DB, Nelson SJ

A clinical comparison of rigid and inflatable endorectal-coil probes for MRI and 3D MR spectroscopic imaging (MRSI) of the prostate.

Journal of magnetic resonance imaging : JMRI

Noworolski SM, Crane JC, Vigneron DB, Kurhanewicz J

Compressed sensing for resolution enhancement of hyperpolarized 13C flyback 3D-MRSI.

Journal of magnetic resonance (San Diego, Calif. : 1997)

Hu S, Lustig M, Chen AP, Crane J, Kerr A, Kelley DA, Hurd R, Kurhanewicz J, Nelson SJ, Pauly JM, Vigneron DB

Three-dimensional J-resolved H-1 magnetic resonance spectroscopic imaging of volunteers and patients with brain tumors at 3T.

Magnetic resonance in medicine

Li Y, Chen AP, Crane JC, Chang SM, Vigneron DB, Nelson SJ

Grid enabled magnetic resonance scanners for near real-time medical image processing

Journal of Parallel and Distributed Computing

Crane JC, Crawford FW, Nelson SJ

Grid enabled magnetic resonance scanners for near real-time medical image processing.

Journal of Parallel and Distributed Computing

Jason C. Crane, Forrest W. Crawford, Sarah J. Nelson

Considerations in applying 3D PRESS H-1 brain MRSI with an eight-channel phased-array coil at 3 T.

Magnetic resonance imaging

Li Y, Osorio JA, Ozturk-Isik E, Chen AP, Xu D, Crane JC, Cha S, Chang S, Berger MS, Vigneron DB, Nelson SJ

A feasibility study of in vivo T1rho imaging of the intervertebral disc.

Magnetic resonance imaging

Blumenkrantz G, Li X, Han ET, Newitt DC, Crane JC, Link TM, Majumdar S

Unaliasing lipid contamination for MR spectroscopic imaging of gliomas at 3T using sensitivity encoding (SENSE).

Magnetic resonance in medicine

Ozturk-Isik E, Crane JC, Cha S, Chang SM, Berger MS, Nelson SJ

Quantitative apparent diffusion coefficients and T2 relaxation times in characterizing contrast enhancing brain tumors and regions of peritumoral edema.

Journal of magnetic resonance imaging : JMRI

Oh J, Cha S, Aiken AH, Han ET, Crane JC, Stainsby JA, Wright GA, Dillon WP, Nelson SJ

The folding mechanism of a beta-sheet: the WW domain.

Journal of molecular biology

Jäger M, Nguyen H, Crane JC, Kelly JW, Gruebele M

Mapping the transition state of the WW domain beta-sheet.

Journal of molecular biology

Crane JC, Koepf EK, Kelly JW, Gruebele M

Stimulated Emission Pumping Spectra and Intramolecular Vibrational Dynamics of DFCO(S 0 ) from 9000 to 20 000 cm -1.

The Journal of Physical Chemistry A

Jason C. Crane, Hakhyun Nam, Horst Clauberg, Harry P. Beal, Ilia J. Kalinovski, Richard G. Shu, C. Bradley Moore

Stimulated emission pumping spectra and intramolecular vibrational dynamics of DFCO(S0) from 9000 to 20,000 cm(-1)

The journal of physical chemistry. A

Crane JC, Nam H, Clauberg H, Beal HP, Kalinovski IJ, Shu RG, Moore CB

Vibrational Assignment and Anharmonic Resonance Analysis of the Dispersed Fluorescence and Stimulated Emission Pumping Spectra of DFCO (S 0 ) up to 9000 cm-1

Journal of Molecular Spectroscopy

Crane JC, Kawai A , Nam H , Clauberg H , Beal HP , Guinn P , Moore CB

Vibrational Assignment of theS1Fluorescence Excitation Spectrum of Formyl Fluoride.

Journal of Molecular Spectroscopy

Jason C. Crane, Hakhyun Nam, Harry P. Beal, Horst Clauberg, Young S. Choi, C.Bradley Moore, John F. Stanton

Vibrational Assignment of theS1Fluorescence Excitation Spectrum of Formyl Fluoride

Journal of Molecular Spectroscopy

Crane JC, Hakhyun Nam, Harry P. Beal, Horst Clauberg, Young S. Choi, C.Bradley Moore, John F. Stanton